Procedure Checklist for Sample Submission |
1. Use appropriate Data Collection
Form to record necessary information
2. Take digital pictures with hand held camera
3. Collect samples for microscopic pictures in the lab
4. Use dissecting microscope to view samples and capture
images
5. Prepare slides of sample for the compound microscope
6. Use compound microscope to view prepared slides and capture
images
7. Complete and submit the DDDI Form
8. Post Submission
Routine
1. Obtain a Data Collection
Form and use it to record the information you gather during the process
2. Take digital pictures with hand held camera
2.1 Types of Images Needed
-
In The Field: helpful shots include site situation, field or
landscape patterns of damage, severity levels, whole plant
appearance. (A comparison to a healthy plant would be helpful).
-
In the Office: visual image of abnormalities present on foliage,
stems, vascular systems, trunks, roots.
-
Include visual images of any fungal structures or bacterial ooze droplets
2.2 Settings for the
Sony Digital Camera
The Sony Digital Camera has a number of internal settings which control
certain qualities of the images you create. The following settings
should work best for use with the Digital Diagnostic Program.
| Rec Mode |
Normal |
| Quality |
Fine |
| Image Size |
640x480 |
| Flash Level |
Normal |
To change or check these settings:
-
Turn the camera on by sliding down the "Power
On/Off" switch
-
Move the Play/Still/
Movie switch to the "Still" position
-
In the lower right corner of the LCD
screen (or the viewfinder), the word "MENU" should be highlighted in
yellow.
-
Press the center of the "Control
Button" and a list of settings beginning with "Clock Set", "Beep"...
should be displayed.
-
Press the upward arrow on the edge of the "Control Button" to move up the
list of options. As you move up the list, each setting will
be highlighted in yellow and the current option for that setting will be
displayed to the right of the highlighted selection.
-
To change the setting, move the highlighted bar to the setting you
would like to change by using the up or down arrow on the edge of the "Control
Button". Then press the center of the "Control Button" to display
the options for that particular setting. Again use the up and down
arrows on the edge of the "Control Button" to highlight the particular
option you would like to set. Press the center of the "Control Button"
to execute that setting selection.
Other settings which will be helpful when making pictures for DDDI include:
2.3 Checklist
for Using the Sony Digital Camera
-
Use the neck strap when the camera is being used. When not
in use, keep the camera in the case.
-
Keep one battery charged at all times.
-
The camera records on 3.5 inch floppy diskettes. Be sure to have
diskettes available.
-
Turn the camera on by sliding down the "Power
On/Off" switch.
-
Move the Play/Still/
Movie switch to the "Still" position.
-
Be sure to remove lens cover.
-
To view the subject through the view finder as you would with a 35 mm camera,
move the Finder/LCD switch
to "FINDER". Or to use the LCD screen to view the subject, move the
switch to LCD.
-
Frame the subject in the viewing screen (or viewfinder)
-
Press the Shutter Button
halfway down until the green light appears in the viewing area.
-
Hold camera steady and press the Shutter Button down fully
-
The image is captured immediately, but it does take a few seconds for the
camera to automatically transfer the image to the diskette.
2.4
Tips for Better Images Using the Sony Digital Camera
-
For best resolution, move the Zoom
Lever as wide as possible by holding lever toward the "W" and get as
close to the subject as possible.
-
Set the camera on "Auto
Focus." After the camera focuses with "Auto Focus", you can move
the switch to "Manual Focus," and use the Focus
Ring, if a sharper picture is needed.
-
If possible a light to medium gray background is desirable.
-
The Spot Meter can be used to take a picture with the appropriate exposure
for just the point you want to focus on.
2.5 Using
MGI Photo Suite Software to Review Images
-
Start MGI Photo Suite software by clicking on the MGI icon on the desktop.
-
Click on "File" from the menu bar, highlight "Get Photos
From", then "Floppy Disk."
-
When prompted, insert the 3.5 floppy disk which you used to record images
using the hand held Sony camera and click "OK."
-
Click on the individual thumbnails to enlarge and search for the images
which best represent the problem. Record the file names (or file
numbers) and a description on the DDDI Sample Submission Log.
-
The DDDI Sample Submission Log is a paper form used to hand record information
about a particular sample submitted. It will help you organize the
images throughout the submission process. Either of the following
forms in Word 97 format can be used. (Sample
Submission Log Type 1) or (Sample
Submission Log Type 2)
-
You can leave the MGI Photo Suite running and just minimize the program
window until your sample submission is complete, or you can click "File",
then "Exit" from the menu bar.
-
When exiting the program, a prompt will appear to ask you if you want to
"Save Changes to Photo Album". Choosing "Abandon" will keep
your Photo Album clear for future use but not erase any of the images from
your floppy diskette.
3. Collect Samples for Microscopic Pictures in the Lab
3.1 Selecting
samples for microscopic images
-
Look for symptoms on foliage, stems, trunk, roots.
-
Many dieback symptoms are caused by poorly functioning roots.
-
Look for fungal bodies on foliage, stems, branches, trunk, roots.
3.2 Collecting
samples for microscopic images
-
There are leaf spot samples and gall samples.
-
There are problems other than leaf spots and foliage galls.
-
Samples should be fresh, adequate in quantity, and representative, including
early, mid, and late stages of disease development.
-
Information should be collected on: recent weather, chemicals/fertilizers
used recently, soil conditions, insects, animals, disease.
3.3 Collecting Leaf Spots
or Galls
-
Leaf Spots: enough to make 3-4 slide mounts.
-
Microscopic diagnoses are most successful with foliage leaf spots and blights.
3.4
Collecting Plants with Stunting, Dieback, Wilt, or Abnormal Color, Shape,
and Development
-
Collect whole plants
-
For large plants 3 or more feet tall, 1 plant is needed.
-
For medium sized plants1-3 feet tall , 3-6 plants usually are needed
-
For small plants 6-12 inches, 5-10 plants are needed.
-
With seedlings less than 6 inches tall, 10-30 plants needed.
-
With turf grass, a 7 by 7 inch square, 3 inch deep sample is needed. One
half of the sample should be alive and healthy; one half should be damaged.
4. Use dissecting microscope to view samples and capture
images of samples
4.1 Using the Dissecting
Microscope
4.2 Types of Images Needed
-
Images of any abnormal specks, dots, swellings or lesions when tissues
are viewed at 10-40X
4.3
Capture the Microscopic Image Using FlashPoint Software
-
Be sure the video camera
is mounted on the microscope with the specimen to be photographed.
-
On the computer, click on the FlashPoint Icon (FPG32).
-
Be sure the knob for the Camera
tube shutter is pulled all the way out.
-
When image appears, position the part of the specimen to be photographed
in the FlashPoint viewing screen, and do the final fine focus on the screen.
-
Click the "Grab" option from the FlashPoint menu bar.
-
Click on the "File" menu from the FlashPoint menu bar and choose
"Save
Image."
-
A "Save in" box will appear at the top of the screen. Select
the drive or folder location to save the images (preferably the 3.5 floppy
where the Sony camera images are already saved). " Files of Type"
should
be set to JPG.
-
Give the image a file name (no more than 8 characters of only letters or
numbers) plus the " .JPG" extension. Click "Open"
to save the image.
-
To capture more images, click on "Live" from the FlashPoint
menu bar and repeat the above 5 steps.
5. Prepare slides of sample for the compound microscope
5.1 Tape Mount Slides
-
Use tape mount if fungal structures (spores) are present on the leaf surface.
-
Press a piece of clear cellophane tape (about 1/2 to 3/4 inch long)
onto the leaf surface.
-
Remove the tape and place it (sticky side down) onto a drop of water (or
cotton blue solution in water) on a slide.
-
View the slide preparation.
5.2 Wet Mount Slides
-
Place a drop of water on a glass slide. Cotton blue stain may be
used instead of water.
-
Using dissecting microscope, focus on the fungal fruiting structures.
-
Cut out a small section of the tissue containing the structures with a
dissecting needle.
-
Do not cut too large a section because you will not be able to view it
clearly with the compound microscope.
-
Place the cut out section in the water droplet.
-
Cut several pieces and place all within the same water droplet to increase
chances of clearly viewing the fungus.
-
Place a cover slip over the water droplet. Place one side of the
cover slip against the water droplet and gently let the cover slip fall
over the droplet.
-
Tap with the blunt end of a dissecting needle to remove air bubbles.
6. Use compound microscope to view prepared slides and
capture images
6.1 Using the Compound
Microscope
-
Slowly turn on the illuminator
switch
-
Move the course focus knob so as to separate the stage from the objective
lens as much as possible
-
Place the prepared slide on the stage
-
Rotate the objective so
that the 4x lens is in place for viewing the specimen
-
While observing from the side, use the coarse focus knob to lower the objective
as far as possible
-
Use the mechanical stage
control knobs to move the slide on the stage so the slide is centered
under the objective
-
Adjust the ocular lenses to fit your eyes so that one image is seen
-
Adjust light intensity as needed using the illuminator
switch
-
Make sure both field iris
and aperture iris are
fully open
-
When viewing the specimen through the eyepieces, push the knob
for the camera tube shutter "In"
-
Use coarse focus knob,
then the fine focus knob
to get a sharp image
-
To increase magnification rotate the 10x objective into place and focus
using the fine focus knob
-
To increase magnification rotate the 40x objective into place and focus
using the fine focus knob
-
Use Caution when adjusting the coarse focus knob as this can raise
the slide into the objective
-
When removing a slide from the stage, first raise the objective lens by
turning the coarse focus knob
-
When viewing a new slide, always start with the lowest power objective
6.2 Types of Images Needed
-
View areas that exhibited abnormal structures under the
stereo microscope.
-
View other areas of tissue damage.
-
Make observations and images at 40, 100, and 400X as appropriate.
-
For most microscopic observations of tissue, make wet mount
slide preparations.
-
When leaves are especially thick or when fungal structures are suspected
to be colorless, or when it is desirable to preserve the arrangements
of spores present on foliage, a tape mount may be used.
-
When fungal structures are suspected to be colorless or difficult to view,
a stain for fungi is sometimes used. Acid Fuchsin or Cotton Blue are two
commonly used fungal stains.
6.3 Capture
the Microscopic Image Using FlashPoint Software
-
Be sure the video camera
is mounted on the microscope with the specimen to be photographed.
-
On the computer click on the FlashPoint Icon (FPG32).
-
Be sure the knob for
the Camera tube shutter is pulled all the way out.
-
When image appears, position the part of the specimen to be photographed
in the FlashPoint viewing screen, and do the final fine focus on the screen.
-
Click the "Grab" option from the FlashPoint menu bar to "snap the
picture".
-
Click on the "File" menu from the FlashPoint menu bar and choose
"Save
image."
-
A "Save in" box will appear at the top of the screen. Select
the drive or folder location to save the images (preferably the 3.5 floppy
where the Sony camera images are already saved). "Files
of type" should be set to JPG.
-
Give the image a file name (no more than 8 characters of only letters or
numbers) plus the " .JPG" extension. Click "Open"
to save the image.
-
To capture more images, click on "Live" from the FlashPoint
menu bar and repeat the above 5 steps.
7. Complete and submit the DDDI form online
7.1 Sample Submission Process
-
Connect to the World Wide Web and use browser to navigate to http://www.dddi.org/aces.
-
Enter username and password and click the Login button.
-
Choose appropriate category under "Submit a Sample."
-
Either select an existing client from the drop down box or complete the
client information for a new client.
-
Enter all pertinent information in the Sample Form. Remember the fields
in red are required.
-
At the "Sample Image 1," you will submit an
image file. To do this, click on the "Browse" button.
A "File Upload" or "Choose File" box will appear at the top
of the screen. In the "Look in" box, select the location of
the image file (in many cases this will be the 3.5 floppy drive).
The "Files of type" box should should be set to "All files"
-
Click on the image file you want to attach as "Sample Image 1" and then
click "Open." This will place the file name and location in the
"Sample image 1" field. Click "Preview" to display the image
you just attached and make sure it is the image you intended to send.
Record this number on the Sample Submission Log.
-
Enter a file Description for the image.
This is a required field describing the sample such as type of plant, magnification,
etc. Record this description on the Sample Submission Log.
-
Repeat the above 3 steps until the necessary number of images (up to 5)
and descriptions have been attached to the form.
-
When all information and image fields are filled as necessary, Click on
"Submit
Form" at the bottom.
-
When the "Information Submitted" screen appears, record the "Submission
Number" on the Sample Submission Log.
7.2 Sample Submission
Log (Type 1; Word 97 Document)
7.3 Sample
Submission Log (Type 2; Word 97 Document)
8. Post Submission
Routine
-
Slowly dim the microscopes and turn them off.
-
Make sure the power to the video camera is off by unplugging the power
cord..
-
Cover the microscopes with dust covers.